binda page on CRAN.

The "binda" package implements functions for multi-class discriminant analysis using binary predictors, for corresponding variable selection, and for dichotomizing continuous data.

Current Version: 1.0.3

Authors: Sebastian Gibb and Korbinian Strimmer.

Documentation and Installation:

Quick install: enter at the R console: install.packages("binda")

Methodology Paper:

Case Study: Analysis of Pancreas Cancer Proteomics Data from Fiedler et al. (2009)

The two R scripts below reproduce the complete data analysis including figures as described in Gibb and Strimmer (2015). Please run in this order:

Preprocessing of the raw mass spectrometry data is done using the MALDIquant software.
  1. fiedler2009-preprocessing.R
  2. fiedler2009-binda-analysis.R